Difference between revisions of "User:Lcozzuto"

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|Name=Luca
 
|Name=Luca
 
|Surnames=Cozzuto
 
|Surnames=Cozzuto
|Photo=Lcozzuto.jpg
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|Photo=Lcozzuto new.jpg
 
|Position=Bioinformatician
 
|Position=Bioinformatician
 
|Email_address=luca.cozzuto@crg.es
 
|Email_address=luca.cozzuto@crg.es
 
|HomePage=http://www.linkedin.com/in/cozzuto
 
|HomePage=http://www.linkedin.com/in/cozzuto
}}
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|ORCID=0000-0003-3194-8892
Luca Cozzuto got a four year PhD in Molecular Medicine at European School of Molecular Medicine in 2009 ([http://www.semm.it]) after a five years degree in Pharmaceutical Biotechnologies at University of Naples "Federico II" in 2004.  
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|LinkedIn=cozzuto
During his degree thesis he studied the structure of chemically modified DNA quadruplex by using NMR together with molecular dynamics [http://www.ncbi.nlm.nih.gov/pubmed/16248036]. During the PhD he was involved in detection and characterization of bacterial RNA repeats showing a common secondary structure [http://www.ncbi.nlm.nih.gov/pubmed/18201379]. Here he learnt programming, database and website developing and a number of bioinformatics tools for detecting non coding RNAs, sequence clustering and sequence comparison. Moreover he was involved in the assembling and annotations of two bacterial genomes (sequenced by using 454 Roche platform)[http://www.ncbi.nlm.nih.gov/pubmed/21685292], in the analysis of chip-seq data (using data obtained by Illumina technology) [http://www.ncbi.nlm.nih.gov/pubmed/20875108] [http://www.cell.com/cell-stem-cell/fulltext/S1934-5909(11)00476-0] [http://www.cell.com/cell-stem-cell/retrieve/pii/S193459091100587X] in giving bioinformatic support to biological research [http://www.ncbi.nlm.nih.gov/pubmed/20439489].
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|Description=<br /><br /><br />
 
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Dr. Luca Cozzuto obtained the PhD in ''Molecular Medicine'' at [http://www.semm.it the European School of Molecular Medicine] in 2009 after getting the Sci.D. in ''Pharmaceutical Biotechnologies'' at the University of Naples ''Federico II'' in 2004.  
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During his master he studied the structure of chemically modified DNA quadruplex by using NMR along with molecular dynamics approaches. In the PhD he was involved in detection and characterization of bacterial RNA repeats with a common secondary structure. Here he learnt programming, database and website developing and a number of bioinformatics tools for detecting non-coding RNAs, sequence clustering and sequence comparison. He was also involved in assembling and annotations of two bacterial genomes, analysis of ChIP-seq data and bioinformatic support to biological research.
  
 
=== My work at the Bioinformatics Unit: ===
 
=== My work at the Bioinformatics Unit: ===
  
 
* Assembly and annotation of genomics and transcriptomics data
 
* Assembly and annotation of genomics and transcriptomics data
* Chip-seq, RNA-seq and clip-seq data analysis
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* ChIP-seq, RNA-seq, metagenomics, small ncRNAseq and CLIP-seq data analysis
* Downstream analysis
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* Downstream analysis (GO enrichment, pathways analysis etc)
* Installation of genome browsers to display genome annotations
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* Installation of genome browsers
* Giving training for biologists and bioinformaticians
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* Training of biologists and bioinformaticians
 
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}}
 
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Luca Cozzuto may be contacted by email at mailto:luca.cozzuto@crg.es
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Latest revision as of 13:50, 10 October 2016

Luca Cozzuto

Lcozzuto new.jpg

Bioinformatician

Email: luca.cozzuto@crg.es

Homepage(s): http://www.linkedin.com/in/cozzuto

ORCID: 0000-0003-3194-8892

LinkedIn: cozzuto




Dr. Luca Cozzuto obtained the PhD in Molecular Medicine at the European School of Molecular Medicine in 2009 after getting the Sci.D. in Pharmaceutical Biotechnologies at the University of Naples Federico II in 2004. During his master he studied the structure of chemically modified DNA quadruplex by using NMR along with molecular dynamics approaches. In the PhD he was involved in detection and characterization of bacterial RNA repeats with a common secondary structure. Here he learnt programming, database and website developing and a number of bioinformatics tools for detecting non-coding RNAs, sequence clustering and sequence comparison. He was also involved in assembling and annotations of two bacterial genomes, analysis of ChIP-seq data and bioinformatic support to biological research.

My work at the Bioinformatics Unit:

  • Assembly and annotation of genomics and transcriptomics data
  • ChIP-seq, RNA-seq, metagenomics, small ncRNAseq and CLIP-seq data analysis
  • Downstream analysis (GO enrichment, pathways analysis etc)
  • Installation of genome browsers
  • Training of biologists and bioinformaticians
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